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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941354.1_cds_XP_016485248.1_76192
CDS Infomation

[gene=LOC107805689] [db_xref=GeneID:107805689] [protein=mitogen-activated protein kinase kinase kinase YODA-like] [protein_id=XP_016485248.1] [location=complement(join(1446..1517,1612..1821,2311..2436,2585..2644,2899..2974,3059..3222,3316..3378,3717..3804,3902..4474,5137..5627))] [gbkey=CDS]
Sequence

ATGCATTGGTGGCAGAGCGCATTCTCATCTTCTTCCTCGCGGGCCTCTTCCACCAGAAAA
GTACATTCCGACGATAGCGTCATCGTCACGCGCGGAAGCAGACGGTGCATCCTGAAAGCA
GCTCTCTTCGGCAGCCGTAGTGTTAGCCGTAGCCGCCATAATATATCCCGTAGGAAGAAG
CACCAGCACCTTGCTGGGAATCACAACGACGTTGTAGATGAATGGCGTTCTCAATGTTCG
TACGAGCATTCACCGGGCAGGGGTTCCTCGGAGGTTCGTCCGCCGCCTCAGCCCCTCCCT
TTGCCGGACTTAAAGGTGCTGCTCCGTCAAGACCCTAATTTCGTTCACGCCCCAAGTGTC
CCATTGCCATCGCCTAGAGAAGGAATTTCGCATCATAATGTTGGAGACGAAACAGAGAGG
GAAAAAGAAAGAGAAGCGGTGGATGTTTTTAACGGTGACGCCCATAATAGTGGTGGAACA
ACACGAGAAGGTAGACTATTAAGCCAAGATGGTCGAAAGAGAACAGAGCTGTCCAGGAAA
TCACCACCTCAGAAGTTGCTTGTGCCAGAAAGAATTGCTCCTGATTTTTGGACAAGTGCT
CCAACTAGTCCTTATGCAAGTCCGGCGCGTAGCCAACTGAAAAGTGGTGATTTTATAATT
AGTCCTCTTTTCATCACACCCCCTGGTGTTTTCCAAGTTTGGTCTGCCCCTGAAATGCCT
CCTTCAGATACCCTTCATGGTTTAGGATTCTATTATAACAAAGCTTTTAGTGTTGATAAT
TCTCCTCTTCATAGTCCAAGATTAAGTCCTCAGCCAAGATCCAAGAGTCCAAGTGGGCCT
GCTTCACCTTTGCATCATCCACCACCAAATGATCAGAGCTCAATGGCACGTCGTGAGAAT
TGTGCTCAAGGCAATGTCCATCCTTTACCCCTTCCTCCTCTAGCTATCCCTCCCGTTTCA
CCACCTACTCCAAAAACAGATATAACACCTGTTAAAGGCCAATGGAAAAAAGGAAAGCTT
ATTGGACGTGGGACATTTGGAAGTGTTTACGTAGCATCAAACAGAGAGACAGGAGCTTTA
TGTGCGATGAAAGAAGTTGAATTATTACCAGATGATCCAAAATCTGCTGAGTCTATAAGG
CAATTAGAACAGGAAATTAAAGTTCTCAGCCAGCTCAAGCACCCAAATATTGTCCAGTAT
TATGGCAGTGAAATAGTTGATGACCGGTTTTACATTTATTTGGAATATGTTCATCCTGGT
TCGATAAATAAATTTATCCAAGACCATTGTGGAGCAATTACAGAATCTATTGTGAGGAAT
TTCACTCGCCACATTCTCTGTGGGTTAGCTTACTTGCACAGTAAAAAGACCATTCACAGG
GACATAAAAGGGGCTAATTTGCTTGTTGATGCTTACGGGGTTGTCAAGCTTGCAGACTTT
GGGATGGCTAAGCATTTAAACGGGCACTCAGCTAACCTCTCTTTAAAAGGAAGTCCATAT
TGGATGGCCCCTGAGCTCTTGCAATCAGTTATGCAGAGGGATAATAGTAGTGATCTTGCC
TTAGCTATTGACATATGGAGTTTGGGTTGTACTATAATTGAGATGTTGAATGGAAAACCG
CCTTGGAGTGAATATGAAGCTGCTGCAGCGATGTTCAAGGTTCTGAAAGATACCCCACCA
ATACCTGACACATTGTCACCAGAAGGGAAAGATTTCTTACATTGTTGTTTCCGTAGAAAT
CCAGCAGAGAGGCCATCAGCTAGCATGTTGCTAGAACATCGATTTGTGAGACTCTCGCAT
CAGCCAGATGTTCCTTCTTTCGTCCAGCAACTTAATGTGATAAGATTGACAGAAAAGTTG
CATTCTCAGAGAGAGCAGCTAAGTTATAAACTTGAATCAGTGCATGTATCATTAGAGAGA
TAA

Peptide Sequence

PEP ID

XP_016485248.1
PEP Infomation

PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Nicotiana tabacum]
Sequence

MHWWQSAFSSSSSRASSTRKVHSDDSVIVTRGSRRCILKAALFGSRSVSRSRHNISRRKK
HQHLAGNHNDVVDEWRSQCSYEHSPGRGSSEVRPPPQPLPLPDLKVLLRQDPNFVHAPSV
PLPSPREGISHHNVGDETEREKEREAVDVFNGDAHNSGGTTREGRLLSQDGRKRTELSRK
SPPQKLLVPERIAPDFWTSAPTSPYASPARSQLKSGDFIISPLFITPPGVFQVWSAPEMP
PSDTLHGLGFYYNKAFSVDNSPLHSPRLSPQPRSKSPSGPASPLHHPPPNDQSSMARREN
CAQGNVHPLPLPPLAIPPVSPPTPKTDITPVKGQWKKGKLIGRGTFGSVYVASNRETGAL
CAMKEVELLPDDPKSAESIRQLEQEIKVLSQLKHPNIVQYYGSEIVDDRFYIYLEYVHPG
SINKFIQDHCGAITESIVRNFTRHILCGLAYLHSKKTIHRDIKGANLLVDAYGVVKLADF
GMAKHLNGHSANLSLKGSPYWMAPELLQSVMQRDNSSDLALAIDIWSLGCTIIEMLNGKP
PWSEYEAAAAMFKVLKDTPPIPDTLSPEGKDFLHCCFRRNPAERPSASMLLEHRFVRLSH
QPDVPSFVQQLNVIRLTEKLHSQREQLSYKLESVHVSLER

Transcript Sequence

Gene sequence data has not been registered.